Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC100858.1-201ENST00000514059 1228 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC090643.2-201ENST00000623442 2029 ntBASIC16.16■□□□□ 0.18
TRIM47Q96LD4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM47Q96LD4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 OR10N1P-201ENST00000392758 869 ntBASIC16.15■□□□□ 0.18
TRIM47Q96LD4 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 AC104961.1-201ENST00000427605 771 ntBASIC16.15■□□□□ 0.18
TRIM47Q96LD4 KRT18P62-201ENST00000446618 1287 ntBASIC16.15■□□□□ 0.18
TRIM47Q96LD4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 AC138761.6-201ENST00000583997 1423 ntBASIC16.15■□□□□ 0.18
TRIM47Q96LD4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 AC011462.4-201ENST00000616866 449 ntBASIC16.15■□□□□ 0.18
TRIM47Q96LD4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM47Q96LD4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM47Q96LD4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 DMBT1P1-203ENST00000636837 4628 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AP000244.1-201ENST00000424582 201 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC092903.1-201ENST00000466506 262 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 RN7SL128P-201ENST00000467883 305 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 BCRP4-201ENST00000506079 804 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC087203.1-201ENST00000532111 1181 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC233280.19-201ENST00000633223 136 ntBASIC16.14■□□□□ 0.17
TRIM47Q96LD4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms