Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC004899.1-201ENST00000424687 1714 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 RPS2P32-201ENST00000439199 892 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 RPL18P13-201ENST00000478088 569 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 FAM8A2P-201ENST00000528813 1142 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC003686.1-201ENST00000550956 1034 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 BNIP3P13-201ENST00000599968 566 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC007663.3-201ENST00000609632 465 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AL591471.1-201ENST00000621855 229 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC090386.2-201ENST00000623010 1039 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 AL021155.1-201ENST00000438808 2637 ntBASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTN4IP1Q8WWV3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 MARK2P16-201ENST00000605714 1723 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SHMT1P1-201ENST00000419974 1312 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 SCARNA21-201ENST00000517026 139 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AC022217.1-201ENST00000521069 738 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 PGAM1P5-201ENST00000548011 764 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AC091271.1-201ENST00000611877 1162 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.69□□□□□ -0.54
RTN4IP1Q8WWV3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms