Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 AC026271.4-201ENST00000578214 1833 ntBASIC21.06■□□□□ 0.96
VPS8Q8N3P4 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS8Q8N3P4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 KRT18P33-201ENST00000398525 1043 ntBASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 HNRNPA3P12-201ENST00000437410 1063 ntBASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 BCL2L12P1-201ENST00000508390 733 ntBASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC005357.2-202ENST00000590507 1060 ntBASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC123912.6-201ENST00000612657 315 ntBASIC21.05■□□□□ 0.96
VPS8Q8N3P4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VPS8Q8N3P4 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 RN7SKP102-201ENST00000411186 315 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AC092570.1-201ENST00000414446 469 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 RPL18AP16-201ENST00000424057 531 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 BICD1P1-201ENST00000457832 1222 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 ABHD17AP9-201ENST00000561925 548 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CCND3P1-201ENST00000438347 580 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AL118516.1-201ENST00000564152 670 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC21.04■□□□□ 0.96
VPS8Q8N3P4 AC006548.2-201ENST00000605217 529 ntBASIC21.04■□□□□ 0.96
VPS8Q8N3P4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms