Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 CTAGE10P-201ENST00000318353 2408 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CDK5Q00535 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.45□□□□□ -0.42
CDK5Q00535 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 RPSAP36-202ENST00000494591 1261 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.45□□□□□ -0.42
CDK5Q00535 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 RN7SL163P-201ENST00000583100 276 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.45□□□□□ -0.42
CDK5Q00535 AP001462.1-201ENST00000594089 452 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.45□□□□□ -0.42
CDK5Q00535 AL021707.6-201ENST00000609212 491 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 AC004923.1-202ENST00000642106 209 ntBASIC12.45□□□□□ -0.42
CDK5Q00535 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.45□□□□□ -0.42
CDK5Q00535 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDK5Q00535 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CDK5Q00535 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 CSF2RBP1-201ENST00000447905 391 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.44□□□□□ -0.42
CDK5Q00535 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.44□□□□□ -0.42
CDK5Q00535 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.44□□□□□ -0.42
CDK5Q00535 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 KRT8P1-201ENST00000557533 1207 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 DNM1P51-201ENST00000558149 522 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 AL132994.2-201ENST00000603120 687 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 AL136295.7-201ENST00000619226 1200 ntBASIC12.44□□□□□ -0.42
CDK5Q00535 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.44□□□□□ -0.42
CDK5Q00535 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms