Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CBX1P83916 AC139530.3-201ENST00000620344 690 ntBASIC14.35□□□□□ -0.11
CBX1P83916 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC14.35□□□□□ -0.11
CBX1P83916 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
CBX1P83916 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 KRT8P12-202ENST00000472924 1397 ntBASIC14.34□□□□□ -0.11
CBX1P83916 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 AC079776.4-201ENST00000511039 504 ntBASIC14.34□□□□□ -0.11
CBX1P83916 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CBX1P83916 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 LINC00628-201ENST00000628516 1289 ntBASIC14.34□□□□□ -0.11
CBX1P83916 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC14.34□□□□□ -0.11
CBX1P83916 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CBX1P83916 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CBX1P83916 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CBX1P83916 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CBX1P83916 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CBX1P83916 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC14.33□□□□□ -0.11
CBX1P83916 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.33□□□□□ -0.11
CBX1P83916 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CBX1P83916 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CBX1P83916 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CBX1P83916 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC14.33□□□□□ -0.11
CBX1P83916 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CBX1P83916 AC138028.6-201ENST00000616106 1482 ntBASIC14.33□□□□□ -0.12
CBX1P83916 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 TATDN2P2-201ENST00000403590 2226 ntBASIC14.33□□□□□ -0.12
CBX1P83916 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 TFAMP1-201ENST00000412727 736 ntBASIC14.33□□□□□ -0.12
CBX1P83916 AL671277.1-201ENST00000429656 993 ntBASIC14.33□□□□□ -0.12
CBX1P83916 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.33□□□□□ -0.12
CBX1P83916 IGHV3-22-201ENST00000520721 359 ntBASIC14.33□□□□□ -0.12
CBX1P83916 PDPK2P-202ENST00000562415 1191 ntBASIC14.33□□□□□ -0.12
CBX1P83916 AC106730.1-201ENST00000566722 1090 ntBASIC14.33□□□□□ -0.12
CBX1P83916 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms