Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD48P09326 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 AC019109.1-201ENST00000401725 1874 ntBASIC14.29□□□□□ -0.12
CD48P09326 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.29□□□□□ -0.12
CD48P09326 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 SCARNA12-201ENST00000459155 270 ntBASIC14.29□□□□□ -0.12
CD48P09326 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.29□□□□□ -0.12
CD48P09326 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 SIGLEC22P-201ENST00000599104 714 ntBASIC14.29□□□□□ -0.12
CD48P09326 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.29□□□□□ -0.12
CD48P09326 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.29□□□□□ -0.12
CD48P09326 AC097724.1-201ENST00000609581 426 ntBASIC14.29□□□□□ -0.12
CD48P09326 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 AC138627.1-207ENST00000641560 1006 ntBASIC14.29□□□□□ -0.12
CD48P09326 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 TEKT4P2-202ENST00000559466 1312 ntBASIC14.29□□□□□ -0.12
CD48P09326 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 CES1P1-201ENST00000421606 1704 ntBASIC14.29□□□□□ -0.12
CD48P09326 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 AC010970.1-201ENST00000445125 1848 ntBASIC14.29□□□□□ -0.12
CD48P09326 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.29□□□□□ -0.12
CD48P09326 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD48P09326 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.29□□□□□ -0.12
CD48P09326 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.28□□□□□ -0.12
CD48P09326 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 MIR1307-201ENST00000408840 149 ntBASIC14.28□□□□□ -0.12
CD48P09326 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.28□□□□□ -0.12
CD48P09326 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.28□□□□□ -0.12
CD48P09326 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.28□□□□□ -0.12
CD48P09326 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.28□□□□□ -0.12
CD48P09326 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 AC091769.1-201ENST00000619576 568 ntBASIC14.28□□□□□ -0.12
CD48P09326 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 GHET1-201ENST00000627071 1906 ntBASIC14.28□□□□□ -0.12
CD48P09326 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.28□□□□□ -0.12
CD48P09326 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD48P09326 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms