Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
POLR3DP05423 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 DKKL1P1-201ENST00000400550 698 ntBASIC16.5■□□□□ 0.23
POLR3DP05423 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 AK2P2-201ENST00000439142 405 ntBASIC16.5■□□□□ 0.23
POLR3DP05423 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.5■□□□□ 0.23
POLR3DP05423 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.5■□□□□ 0.23
POLR3DP05423 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 MIR497HG-202ENST00000572453 3838 ntBASIC16.5■□□□□ 0.23
POLR3DP05423 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.5■□□□□ 0.23
POLR3DP05423 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR3DP05423 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR3DP05423 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 FMO6P-201ENST00000236166 1620 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.49■□□□□ 0.23
POLR3DP05423 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
POLR3DP05423 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 AC073210.1-201ENST00000414799 232 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 AC097065.1-201ENST00000425737 517 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 MIR4472-1-201ENST00000584349 80 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.49■□□□□ 0.23
POLR3DP05423 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR3DP05423 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR3DP05423 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.49■□□□□ 0.23
POLR3DP05423 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 FUCA1P1-201ENST00000374476 1351 ntBASIC16.49■□□□□ 0.23
POLR3DP05423 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR3DP05423 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
POLR3DP05423 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR3DP05423 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR3DP05423 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.48■□□□□ 0.23
POLR3DP05423 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR3DP05423 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR3DP05423 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms