Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 AL139424.3-202ENST00000641619 917 ntBASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 KRT8P18-201ENST00000413425 1445 ntBASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPARGC1AQ9UBK2 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 STRCP1-201ENST00000509801 5328 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 RN7SL788P-201ENST00000460504 316 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 SIGLEC22P-201ENST00000599104 714 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC015967.2-201ENST00000624092 234 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AC006435.4-201ENST00000625037 234 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AL356737.1-201ENST00000634391 234 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 TBC1D27-202ENST00000424239 1573 ntBASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.46□□□□□ -0.09
PPARGC1AQ9UBK2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.46□□□□□ -0.1
PPARGC1AQ9UBK2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 MAGEA5-201ENST00000446757 942 ntBASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.45□□□□□ -0.1
PPARGC1AQ9UBK2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms