Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PSME2-213ENST00000560410 755 ntTSL 3 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC093802.2-201ENST00000567853 583 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 SIGLEC17P-201ENST00000593736 484 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 EGLN3-205ENST00000547327 2849 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 PGAM1P2-201ENST00000436071 725 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 RN7SL307P-201ENST00000490342 295 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AP003717.2-201ENST00000534962 898 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 IGHV1OR16-2-201ENST00000564937 349 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 OR5G5P-204ENST00000627642 621 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC013268.4-201ENST00000637413 2228 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AP005018.2-201ENST00000528464 822 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 MESTP2-201ENST00000559787 889 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC078880.3-201ENST00000603439 1121 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC090093.1-201ENST00000611315 271 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 RN7SL553P-201ENST00000482215 298 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 AP001120.3-201ENST00000585729 489 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 RN7SK-201ENST00000636484 328 ntBASIC12.4□□□□□ -0.42
CHD8Q9HCK8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CHD8Q9HCK8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms