Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 FAM90A2P-201ENST00000511144 1395 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 FAM90A25P-201ENST00000528404 1395 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC090774.4-201ENST00000578888 1372 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MYADML-201ENST00000474610 2147 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AL589826.1-201ENST00000340697 249 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 UBE2V2P3-201ENST00000433562 437 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 RN7SL530P-201ENST00000485097 298 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AP001981.1-201ENST00000531132 738 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AL731537.2-201ENST00000561565 951 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC020922.3-201ENST00000595064 547 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 BNIP3P40-201ENST00000596017 556 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC092474.3-201ENST00000603022 568 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AL021578.1-201ENST00000613646 709 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC068620.4-201ENST00000636730 1182 ntBASIC12.67□□□□□ -0.38
USB1Q9BQ65 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
USB1Q9BQ65 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
USB1Q9BQ65 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.66□□□□□ -0.38
USB1Q9BQ65 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 MST1P2-201ENST00000457982 2291 ntBASIC12.66□□□□□ -0.38
USB1Q9BQ65 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
USB1Q9BQ65 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms