Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 Z98257.2-202ENST00000641138 1548 ntBASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCDC50Q8IVM0 TRIM80P-201ENST00000455685 2848 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC078875.1-201ENST00000431907 724 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 EIF4HP1-201ENST00000453115 687 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 BNIP3P13-201ENST00000599968 566 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC007663.3-201ENST00000609632 465 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AL136295.7-201ENST00000619226 1200 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 AC020917.4-201ENST00000623994 1999 ntBASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC50Q8IVM0 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 MIR658-201ENST00000385210 100 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 MIR663B-201ENST00000408361 115 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 AC119751.2-201ENST00000504529 210 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 AC017083.2-201ENST00000608069 979 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 AC090164.2-201ENST00000611487 516 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 AL358781.1-202ENST00000321081 1360 ntBASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC50Q8IVM0 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC50Q8IVM0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms