Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 LINC02228-202ENST00000641261 2489 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 NME2P1-201ENST00000426182 414 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 AC005722.1-201ENST00000431878 964 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.47□□□□□ -0.41
CDK5Q00535 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.47□□□□□ -0.41
CDK5Q00535 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.47□□□□□ -0.41
CDK5Q00535 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.47□□□□□ -0.41
CDK5Q00535 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.47□□□□□ -0.41
CDK5Q00535 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CDK5Q00535 AL157813.1-201ENST00000612996 587 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.47□□□□□ -0.41
CDK5Q00535 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.47□□□□□ -0.41
CDK5Q00535 AC068587.8-201ENST00000641239 219 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CDK5Q00535 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CDK5Q00535 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CDK5Q00535 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC138761.6-201ENST00000583997 1423 ntBASIC12.46□□□□□ -0.41
CDK5Q00535 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CDK5Q00535 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.46□□□□□ -0.41
CDK5Q00535 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.46□□□□□ -0.41
CDK5Q00535 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.46□□□□□ -0.41
CDK5Q00535 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.46□□□□□ -0.41
CDK5Q00535 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC009779.1-201ENST00000551138 283 ntBASIC12.46□□□□□ -0.41
CDK5Q00535 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.46□□□□□ -0.41
CDK5Q00535 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC106886.1-201ENST00000568660 600 ntBASIC12.46□□□□□ -0.41
CDK5Q00535 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 AC090164.2-201ENST00000611487 516 ntBASIC12.46□□□□□ -0.41
CDK5Q00535 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.46□□□□□ -0.41
CDK5Q00535 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CDK5Q00535 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDK5Q00535 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CDK5Q00535 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CDK5Q00535 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
CDK5Q00535 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
CDK5Q00535 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CDK5Q00535 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CDK5Q00535 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDK5Q00535 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.45□□□□□ -0.42
CDK5Q00535 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms