Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 AC072061.1-201ENST00000569710 2234 ntBASIC11.2□□□□□ -0.62
LMO4P61968 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 GH1-203ENST00000351388 685 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
LMO4P61968 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
LMO4P61968 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 FAU-202ENST00000434372 533 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC11.2□□□□□ -0.62
LMO4P61968 MTHFD2P7-201ENST00000483867 983 ntBASIC11.2□□□□□ -0.62
LMO4P61968 RNA5SP420-201ENST00000516997 137 ntBASIC11.2□□□□□ -0.62
LMO4P61968 AP000920.1-201ENST00000531824 344 ntBASIC11.2□□□□□ -0.62
LMO4P61968 RN7SL162P-201ENST00000579233 292 ntBASIC11.2□□□□□ -0.62
LMO4P61968 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC11.2□□□□□ -0.62
LMO4P61968 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 ZNF493-208ENST00000599461 1769 ntBASIC11.2□□□□□ -0.62
LMO4P61968 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.2□□□□□ -0.62
LMO4P61968 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LMO4P61968 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LMO4P61968 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 CA6-205ENST00000480186 1493 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 HNRNPA3P12-201ENST00000437410 1063 ntBASIC11.19□□□□□ -0.62
LMO4P61968 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC11.19□□□□□ -0.62
LMO4P61968 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC11.19□□□□□ -0.62
LMO4P61968 SNORA47-201ENST00000458862 138 ntBASIC11.19□□□□□ -0.62
LMO4P61968 BCL2L12P1-201ENST00000508390 733 ntBASIC11.19□□□□□ -0.62
LMO4P61968 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC11.19□□□□□ -0.62
LMO4P61968 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC11.19□□□□□ -0.62
LMO4P61968 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LMO4P61968 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LMO4P61968 HNRNPA1P16-201ENST00000575692 955 ntBASIC11.19□□□□□ -0.62
LMO4P61968 MIR5091-201ENST00000578707 93 ntBASIC11.19□□□□□ -0.62
LMO4P61968 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC11.19□□□□□ -0.62
LMO4P61968 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC11.19□□□□□ -0.62
LMO4P61968 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LMO4P61968 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms