Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.31■□□□□ 0.2
TNNI2P48788 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 AL136084.1-201ENST00000449172 318 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 AC091304.3-201ENST00000566500 716 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 FBXO36P1-201ENST00000579006 471 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.31■□□□□ 0.2
TNNI2P48788 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC16.31■□□□□ 0.2
TNNI2P48788 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 AC137723.2-201ENST00000623540 398 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 TP73-201ENST00000346387 4854 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TNNI2P48788 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.31■□□□□ 0.2
TNNI2P48788 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
TNNI2P48788 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 TCAM1P-207ENST00000485295 1537 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TNNI2P48788 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TNNI2P48788 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.3■□□□□ 0.2
TNNI2P48788 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 AC136604.1-202ENST00000425471 771 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
TNNI2P48788 AC010086.2-201ENST00000428616 226 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 ZNF877P-201ENST00000437614 612 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 RPS18P9-201ENST00000482817 460 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 RPL29P2-201ENST00000488409 460 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.3■□□□□ 0.2
TNNI2P48788 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.3■□□□□ 0.2
TNNI2P48788 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.3■□□□□ 0.2
TNNI2P48788 MIR3940-201ENST00000579148 102 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 MIR4746-201ENST00000579802 71 ntBASIC16.3■□□□□ 0.2
TNNI2P48788 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TNNI2P48788 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.3■□□□□ 0.2
TNNI2P48788 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TNNI2P48788 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNNI2P48788 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 KRT8P42-201ENST00000405771 1399 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 AC064850.1-201ENST00000413279 1398 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.29■□□□□ 0.2
TNNI2P48788 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.29■□□□□ 0.2
TNNI2P48788 AC120498.7-201ENST00000562876 330 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 AC079414.2-201ENST00000567157 1104 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 MIR4254-201ENST00000581063 76 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 KF455155.1-201ENST00000604493 303 ntBASIC16.29■□□□□ 0.2
TNNI2P48788 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms