Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 AL133517.1-201ENST00000413412 748 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 HLA-DRB6-202ENST00000437183 1090 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 AQP7-207ENST00000447660 998 ntTSL 2 BASIC15.24■□□□□ 0.03
TM4SF4P48230 RN7SL105P-201ENST00000475661 299 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 AC010442.2-201ENST00000509301 407 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 AC025165.4-201ENST00000602327 433 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TM4SF4P48230 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TM4SF4P48230 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM4SF4P48230 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.24■□□□□ 0.03
TM4SF4P48230 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 LINC00552-201ENST00000625151 2579 ntBASIC15.24■□□□□ 0.03
TM4SF4P48230 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AHCYP7-201ENST00000560847 1308 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC025538.1-201ENST00000510707 1486 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC15.23■□□□□ 0.03
TM4SF4P48230 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 SNORA50C-201ENST00000408535 133 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC15.23■□□□□ 0.03
TM4SF4P48230 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 PTS-204ENST00000525803 625 ntTSL 3 BASIC15.23■□□□□ 0.03
TM4SF4P48230 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AD000091.1-201ENST00000592379 287 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 AC138430.2-201ENST00000624068 504 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 SNORA50.1-201ENST00000628590 135 ntBASIC15.23■□□□□ 0.03
TM4SF4P48230 UBA3-212ENST00000630585 390 ntTSL 4 BASIC15.23■□□□□ 0.03
TM4SF4P48230 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC15.23■□□□□ 0.03
TM4SF4P48230 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM4SF4P48230 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC15.22■□□□□ 0.03
TM4SF4P48230 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TM4SF4P48230 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 AC007312.1-201ENST00000427493 258 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 AKIRIN1P2-201ENST00000440655 570 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 AC007690.1-201ENST00000451924 468 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 AL391822.1-201ENST00000452580 562 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC15.22■□□□□ 0.03
TM4SF4P48230 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 EEF1GP2-201ENST00000509352 1243 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC15.22■□□□□ 0.03
TM4SF4P48230 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms