Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 AL928921.2-201ENST00000641325 2442 ntBASIC13.99□□□□□ -0.17
XPAP23025 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.98□□□□□ -0.17
XPAP23025 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 AC093462.1-201ENST00000621167 1683 ntBASIC13.98□□□□□ -0.17
XPAP23025 AC015909.5-201ENST00000624336 2266 ntBASIC13.98□□□□□ -0.17
XPAP23025 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.98□□□□□ -0.17
XPAP23025 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 OR52M2P-201ENST00000414298 959 ntBASIC13.98□□□□□ -0.17
XPAP23025 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
XPAP23025 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.98□□□□□ -0.17
XPAP23025 AC004837.1-201ENST00000446267 564 ntBASIC13.98□□□□□ -0.17
XPAP23025 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.98□□□□□ -0.17
XPAP23025 PRSS3P1-201ENST00000503996 742 ntBASIC13.98□□□□□ -0.17
XPAP23025 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.98□□□□□ -0.17
XPAP23025 VENTXP3-201ENST00000546480 773 ntBASIC13.98□□□□□ -0.17
XPAP23025 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 AL049840.2-201ENST00000602722 535 ntBASIC13.98□□□□□ -0.17
XPAP23025 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 AL365181.3-201ENST00000605886 3222 ntBASIC13.98□□□□□ -0.17
XPAP23025 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.98□□□□□ -0.17
XPAP23025 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
XPAP23025 AC111170.3-201ENST00000624282 2464 ntBASIC13.98□□□□□ -0.17
XPAP23025 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
XPAP23025 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
XPAP23025 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XPAP23025 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 FMO6P-201ENST00000236166 1620 ntBASIC13.97□□□□□ -0.17
XPAP23025 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
XPAP23025 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.97□□□□□ -0.17
XPAP23025 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.97□□□□□ -0.17
XPAP23025 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.97□□□□□ -0.17
XPAP23025 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 AC093300.1-201ENST00000510368 1201 ntBASIC13.97□□□□□ -0.17
XPAP23025 AC100858.1-201ENST00000514059 1228 ntBASIC13.97□□□□□ -0.17
XPAP23025 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.97□□□□□ -0.17
XPAP23025 AC068867.1-201ENST00000559855 150 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms