Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
GAPDHP04406 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
GAPDHP04406 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.65□□□□□ -0.54
GAPDHP04406 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
GAPDHP04406 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
GAPDHP04406 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
GAPDHP04406 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
GAPDHP04406 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.65□□□□□ -0.54
GAPDHP04406 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
GAPDHP04406 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
GAPDHP04406 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
GAPDHP04406 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
GAPDHP04406 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
GAPDHP04406 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.65□□□□□ -0.55
GAPDHP04406 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
GAPDHP04406 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
GAPDHP04406 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
GAPDHP04406 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.64□□□□□ -0.55
GAPDHP04406 MIR1908-201ENST00000410394 80 ntBASIC11.64□□□□□ -0.55
GAPDHP04406 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 OR2R1P-201ENST00000441404 914 ntBASIC11.64□□□□□ -0.55
GAPDHP04406 KRT18P15-201ENST00000458108 1291 ntBASIC11.64□□□□□ -0.55
GAPDHP04406 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.64□□□□□ -0.55
GAPDHP04406 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.64□□□□□ -0.55
GAPDHP04406 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.64□□□□□ -0.55
GAPDHP04406 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 AL118558.3-201ENST00000607414 1079 ntBASIC11.64□□□□□ -0.55
GAPDHP04406 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.64□□□□□ -0.55
GAPDHP04406 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.64□□□□□ -0.55
GAPDHP04406 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.64□□□□□ -0.55
GAPDHP04406 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
GAPDHP04406 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.63□□□□□ -0.55
GAPDHP04406 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
GAPDHP04406 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.63□□□□□ -0.55
GAPDHP04406 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
GAPDHP04406 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.63□□□□□ -0.55
GAPDHP04406 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.63□□□□□ -0.55
GAPDHP04406 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.63□□□□□ -0.55
GAPDHP04406 OR2I1P-208ENST00000641137 4948 ntBASIC11.63□□□□□ -0.55
GAPDHP04406 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.63□□□□□ -0.55
GAPDHP04406 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
GAPDHP04406 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
GAPDHP04406 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms