Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
ALX3O95076 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AC103592.1-201ENST00000394513 664 ntBASIC12.36□□□□□ -0.43
ALX3O95076 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 AC234783.1-201ENST00000441761 496 ntBASIC12.36□□□□□ -0.43
ALX3O95076 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AL390728.6-201ENST00000566446 1246 ntBASIC12.36□□□□□ -0.43
ALX3O95076 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 AC132938.2-201ENST00000579188 680 ntBASIC12.36□□□□□ -0.43
ALX3O95076 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 AC008735.3-201ENST00000596646 500 ntBASIC12.36□□□□□ -0.43
ALX3O95076 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.36□□□□□ -0.43
ALX3O95076 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.36□□□□□ -0.43
ALX3O95076 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ALX3O95076 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.36□□□□□ -0.43
ALX3O95076 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.36□□□□□ -0.43
ALX3O95076 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AHCYP2-201ENST00000430630 1300 ntBASIC12.36□□□□□ -0.43
ALX3O95076 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.36□□□□□ -0.43
ALX3O95076 AL008718.2-201ENST00000609206 1313 ntBASIC12.36□□□□□ -0.43
ALX3O95076 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALX3O95076 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 KRT8P4-201ENST00000509735 1454 ntBASIC12.35□□□□□ -0.43
ALX3O95076 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.35□□□□□ -0.43
ALX3O95076 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ALX3O95076 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.35□□□□□ -0.43
ALX3O95076 HMGA1P1-201ENST00000415560 1062 ntBASIC12.35□□□□□ -0.43
ALX3O95076 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 HMGB3P14-201ENST00000494195 599 ntBASIC12.35□□□□□ -0.43
ALX3O95076 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 RBM8B-201ENST00000555532 525 ntBASIC12.35□□□□□ -0.43
ALX3O95076 AP005482.1-201ENST00000563722 1273 ntBASIC12.35□□□□□ -0.43
ALX3O95076 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.35□□□□□ -0.43
ALX3O95076 PPY2P-201ENST00000582808 702 ntBASIC12.35□□□□□ -0.43
ALX3O95076 AC103810.3-201ENST00000583567 96 ntBASIC12.35□□□□□ -0.43
ALX3O95076 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.35□□□□□ -0.43
ALX3O95076 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ALX3O95076 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.35□□□□□ -0.43
ALX3O95076 MIR6720-201ENST00000611664 98 ntBASIC12.35□□□□□ -0.43
ALX3O95076 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.35□□□□□ -0.43
ALX3O95076 AL591471.1-201ENST00000621855 229 ntBASIC12.35□□□□□ -0.43
ALX3O95076 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.35□□□□□ -0.43
ALX3O95076 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ALX3O95076 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms