Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AC019109.1-201ENST00000401725 1874 ntBASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 DPY19L2P5-201ENST00000456300 331 ntBASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 KRT8P2-201ENST00000556193 944 ntBASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AC138761.6-201ENST00000583997 1423 ntBASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.48■□□□□ 0.07
COL4A3BPQ9Y5P4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 PDXDC2P-206ENST00000534700 1315 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 ODCP-201ENST00000459650 1639 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC092638.2-201ENST00000441105 947 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 COQ10BP2-201ENST00000513804 724 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC068867.1-201ENST00000559855 150 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC140113.1-201ENST00000603467 169 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 MIR6858-201ENST00000620733 67 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CR383656.2-201ENST00000548656 2254 ntBASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL4A3BPQ9Y5P4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
COL4A3BPQ9Y5P4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL4A3BPQ9Y5P4 AF013593.1-201ENST00000458074 1487 ntBASIC15.46■□□□□ 0.07
COL4A3BPQ9Y5P4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL4A3BPQ9Y5P4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
COL4A3BPQ9Y5P4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms