Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 AL355864.2-201ENST00000447420 863 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 RN7SL692P-201ENST00000464677 288 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 TDH-203ENST00000531764 1110 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 DUX4L46-201ENST00000566845 751 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 AP001462.1-201ENST00000594089 452 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 AL354989.2-201ENST00000435838 1540 ntBASIC11.28□□□□□ -0.6
RAB40CQ96S21 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB40CQ96S21 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 PCDHB17P-202ENST00000623466 3066 ntBASIC11.27□□□□□ -0.6
RAB40CQ96S21 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB40CQ96S21 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB40CQ96S21 CICP9-201ENST00000444451 1913 ntBASIC11.27□□□□□ -0.6
RAB40CQ96S21 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RAB40CQ96S21 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
RAB40CQ96S21 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.27□□□□□ -0.6
RAB40CQ96S21 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms