Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 SNORA50D-201ENST00000408059 134 ntBASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TUBGCP6Q96RT7 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 POLR3DP1-201ENST00000398689 1176 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 HMGN1P4-201ENST00000419500 290 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AC008267.3-201ENST00000448776 712 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 RN7SL477P-201ENST00000488440 286 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AL139317.2-201ENST00000556998 158 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AL158032.2-201ENST00000616818 195 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 MIEF1-215ENST00000637854 213 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AC106872.9-201ENST00000512437 1393 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AC073869.1-201ENST00000415574 2762 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AC011239.2-201ENST00000624820 1489 ntBASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBGCP6Q96RT7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 TPM3P7-201ENST00000338274 732 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 MKL1-204ENST00000402630 747 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 MKRN5P-201ENST00000445263 1467 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AC067942.1-202ENST00000471756 1057 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 MSNP1-201ENST00000511640 1732 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 RN7SL460P-201ENST00000582806 258 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FAM86FP-201ENST00000338711 969 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AP000343.1-201ENST00000440602 385 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 RAB42P1-201ENST00000555078 316 ntBASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 FOS-205ENST00000555242 629 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBGCP6Q96RT7 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms