Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 DUTP3-201ENST00000450025 415 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AL353637.1-201ENST00000451571 732 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC024681.1-201ENST00000521917 487 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC145285.5-201ENST00000562217 361 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 MIR3940-201ENST00000579148 102 ntBASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RCC2P5-201ENST00000492126 1487 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 TEKT4P2-202ENST00000559466 1312 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC125807.2-201ENST00000513358 3514 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC098934.1-203ENST00000442868 1262 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC005077.2-201ENST00000449786 690 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RN7SL788P-201ENST00000460504 316 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RN7SL665P-201ENST00000578793 300 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 MIR4525-201ENST00000580000 75 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 GPR182-203ENST00000622922 591 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 AC099521.3-201ENST00000624251 2938 ntBASIC12.97□□□□□ -0.33
NUP43Q8NFH3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP43Q8NFH3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 PES1P2-201ENST00000449745 1735 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms