Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL031577.1-201ENST00000339867 399 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 OR7E122P-201ENST00000383606 1017 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 RPL3P9-201ENST00000463217 1183 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 KRT8P25-201ENST00000473150 1456 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 HAX1-211ENST00000532105 771 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL009178.2-201ENST00000597278 2719 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AL158032.2-201ENST00000616818 195 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC026120.2-201ENST00000617239 309 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 AC073592.10-201ENST00000624789 597 ntBASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SNORA47-201ENST00000458862 138 ntBASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 NEMF-210ENST00000556672 590 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 IGHV1OR16-3-201ENST00000568138 205 ntBASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 AC002511.3-201ENST00000638098 420 ntBASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms