Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL645939.5-201ENST00000606834 243 ntBASIC12.08□□□□□ -0.48
UBA52P62987 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
UBA52P62987 AL353726.2-201ENST00000623259 884 ntBASIC12.08□□□□□ -0.48
UBA52P62987 AC128714.1-201ENST00000637035 887 ntBASIC12.08□□□□□ -0.48
UBA52P62987 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 AC022400.8-201ENST00000623453 3599 ntBASIC12.08□□□□□ -0.48
UBA52P62987 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
UBA52P62987 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 TUBB8P4-201ENST00000511806 1324 ntBASIC12.08□□□□□ -0.48
UBA52P62987 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.08□□□□□ -0.48
UBA52P62987 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 AC027369.3-201ENST00000530465 3707 ntBASIC12.08□□□□□ -0.48
UBA52P62987 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.07□□□□□ -0.48
UBA52P62987 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.07□□□□□ -0.48
UBA52P62987 PCDHB19P-202ENST00000625133 2914 ntBASIC12.07□□□□□ -0.48
UBA52P62987 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
UBA52P62987 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 AC091046.1-201ENST00000331871 207 ntBASIC12.07□□□□□ -0.48
UBA52P62987 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
UBA52P62987 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.07□□□□□ -0.48
UBA52P62987 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.07□□□□□ -0.48
UBA52P62987 FTLP1-201ENST00000449155 526 ntBASIC12.07□□□□□ -0.48
UBA52P62987 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.07□□□□□ -0.48
UBA52P62987 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 AC134698.3-201ENST00000523880 214 ntBASIC12.07□□□□□ -0.48
UBA52P62987 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.07□□□□□ -0.48
UBA52P62987 AC013355.1-201ENST00000562625 723 ntBASIC12.07□□□□□ -0.48
UBA52P62987 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.07□□□□□ -0.48
UBA52P62987 AC138466.3-201ENST00000619983 221 ntBASIC12.07□□□□□ -0.48
UBA52P62987 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 PI4KAP2-201ENST00000360806 2080 ntBASIC12.07□□□□□ -0.48
UBA52P62987 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 AC115284.2-201ENST00000624646 2054 ntBASIC12.07□□□□□ -0.48
UBA52P62987 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
UBA52P62987 GHET1-201ENST00000627071 1906 ntBASIC12.07□□□□□ -0.48
UBA52P62987 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.07□□□□□ -0.48
UBA52P62987 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.07□□□□□ -0.48
UBA52P62987 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBA52P62987 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms