Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S1P61966 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.88□□□□□ -0.19
AP1S1P61966 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S1P61966 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AP1S1P61966 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AP1S1P61966 AP003398.1-201ENST00000531124 318 ntBASIC13.88□□□□□ -0.19
AP1S1P61966 IQSEC3P1-201ENST00000538799 536 ntBASIC13.88□□□□□ -0.19
AP1S1P61966 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 MIR4649-201ENST00000582839 64 ntBASIC13.88□□□□□ -0.19
AP1S1P61966 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.88□□□□□ -0.19
AP1S1P61966 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 AGAP12P-201ENST00000585227 2359 ntBASIC13.88□□□□□ -0.19
AP1S1P61966 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP1S1P61966 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S1P61966 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.88□□□□□ -0.19
AP1S1P61966 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.88□□□□□ -0.19
AP1S1P61966 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP1S1P61966 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 PCDHA5-203ENST00000614258 4248 ntBASIC13.87□□□□□ -0.19
AP1S1P61966 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 AC090502.4-201ENST00000551714 1386 ntBASIC13.87□□□□□ -0.19
AP1S1P61966 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms