Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CACNA2D1P54289 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 AC090502.4-201ENST00000551714 1386 ntBASIC14.7□□□□□ -0.06
CACNA2D1P54289 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.7□□□□□ -0.06
CACNA2D1P54289 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.7□□□□□ -0.06
CACNA2D1P54289 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CACNA2D1P54289 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CACNA2D1P54289 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.7□□□□□ -0.06
CACNA2D1P54289 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 AC018463.1-201ENST00000456674 917 ntBASIC14.69□□□□□ -0.06
CACNA2D1P54289 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PRSS3P1-201ENST00000503996 742 ntBASIC14.69□□□□□ -0.06
CACNA2D1P54289 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CACNA2D1P54289 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CACNA2D1P54289 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC004837.1-201ENST00000446267 564 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 LYPLA2P1-203ENST00000447689 696 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC025186.1-201ENST00000478174 870 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 RN7SL767P-201ENST00000493013 295 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 RN7SKP155-201ENST00000516031 288 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 AL009176.1-201ENST00000607876 650 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 AC105137.3-201ENST00000617588 984 ntBASIC14.68□□□□□ -0.06
CACNA2D1P54289 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CACNA2D1P54289 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CACNA2D1P54289 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms