Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBRP36941 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBRP36941 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBRP36941 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 ZSCAN5DP-201ENST00000600684 1488 ntBASIC13.87□□□□□ -0.19
LTBRP36941 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBRP36941 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LTBRP36941 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBRP36941 IL6RP1-201ENST00000417848 1273 ntBASIC13.87□□□□□ -0.19
LTBRP36941 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBRP36941 RPE-208ENST00000436630 1128 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBRP36941 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBRP36941 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.87□□□□□ -0.19
LTBRP36941 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC13.87□□□□□ -0.19
LTBRP36941 ST3GAL1P1-201ENST00000513810 1014 ntBASIC13.87□□□□□ -0.19
LTBRP36941 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.87□□□□□ -0.19
LTBRP36941 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 MIR4459-201ENST00000581837 66 ntBASIC13.87□□□□□ -0.19
LTBRP36941 PSME3-213ENST00000592169 826 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBRP36941 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LTBRP36941 RN7SL827P-201ENST00000607480 288 ntBASIC13.87□□□□□ -0.19
LTBRP36941 RN7SL341P-201ENST00000613745 298 ntBASIC13.87□□□□□ -0.19
LTBRP36941 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.87□□□□□ -0.19
LTBRP36941 AL117379.1-201ENST00000619319 677 ntBASIC13.87□□□□□ -0.19
LTBRP36941 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBRP36941 MIEF1-215ENST00000637854 213 ntBASIC13.87□□□□□ -0.19
LTBRP36941 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBRP36941 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 ZDHHC8P1-202ENST00000418264 1403 ntBASIC13.87□□□□□ -0.19
LTBRP36941 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 AC124944.3-201ENST00000607976 1304 ntBASIC13.87□□□□□ -0.19
LTBRP36941 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LTBRP36941 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBRP36941 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC13.86□□□□□ -0.19
LTBRP36941 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LTBRP36941 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC13.86□□□□□ -0.19
LTBRP36941 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 RN7SL16P-201ENST00000476316 269 ntBASIC13.86□□□□□ -0.19
LTBRP36941 AC022121.1-201ENST00000484584 579 ntBASIC13.86□□□□□ -0.19
LTBRP36941 DIS3L2P1-201ENST00000509197 559 ntBASIC13.86□□□□□ -0.19
LTBRP36941 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 AC009132.1-201ENST00000565194 320 ntBASIC13.86□□□□□ -0.19
LTBRP36941 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC13.86□□□□□ -0.19
LTBRP36941 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LTBRP36941 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LTBRP36941 MARK2P9-201ENST00000430958 1727 ntBASIC13.86□□□□□ -0.19
LTBRP36941 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.86□□□□□ -0.19
LTBRP36941 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms