Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ZIC3O60481 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.4□□□□□ -0.42
ZIC3O60481 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZIC3O60481 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
ZIC3O60481 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZIC3O60481 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZIC3O60481 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 GULOP-201ENST00000454030 748 ntBASIC12.39□□□□□ -0.43
ZIC3O60481 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC084752.1-201ENST00000509766 622 ntBASIC12.39□□□□□ -0.43
ZIC3O60481 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.39□□□□□ -0.43
ZIC3O60481 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 CES1P2-201ENST00000566467 1242 ntBASIC12.39□□□□□ -0.43
ZIC3O60481 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 AC073548.1-201ENST00000624088 1882 ntBASIC12.39□□□□□ -0.43
ZIC3O60481 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ZIC3O60481 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
ZIC3O60481 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZIC3O60481 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZIC3O60481 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC253536.4-201ENST00000440539 267 ntBASIC12.38□□□□□ -0.43
ZIC3O60481 PIN4P1-201ENST00000451079 396 ntBASIC12.38□□□□□ -0.43
ZIC3O60481 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms