Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AL136084.1-201ENST00000449172 318 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 BCRP4-201ENST00000506079 804 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 MIR4746-201ENST00000579802 71 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 DGAT2L7P-201ENST00000602462 744 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 KRT8P42-201ENST00000405771 1399 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RCC2P5-201ENST00000492126 1487 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 NHP2P1-201ENST00000335274 462 ntBASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 OR7E155P-201ENST00000412208 1014 ntBASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 RPS18P9-201ENST00000482817 460 ntBASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AC112250.1-201ENST00000504640 745 ntBASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 AC064850.1-201ENST00000413279 1398 ntBASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DNMT3BQ9UBC3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DNMT3BQ9UBC3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DNMT3BQ9UBC3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.29□□□□□ -0.12
DNMT3BQ9UBC3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.29□□□□□ -0.12
DNMT3BQ9UBC3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms