Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AL645933.1-201ENST00000440087 609 ntBASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AC020910.6-201ENST00000623084 1459 ntBASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 Z98259.2-201ENST00000641583 609 ntBASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.3■□□□□ 0.04
CALCOCO1Q9P1Z2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 AC007663.3-201ENST00000609632 465 ntBASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CALCOCO1Q9P1Z2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AL662890.1-201ENST00000396818 632 ntBASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AL157407.1-201ENST00000435784 904 ntBASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.28■□□□□ 0.04
CALCOCO1Q9P1Z2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms