Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC10.6□□□□□ -0.71
VGLL1Q99990 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.6□□□□□ -0.71
VGLL1Q99990 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.6□□□□□ -0.71
VGLL1Q99990 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 IGHV3-72-202ENST00000621503 303 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC010970.1-201ENST00000445125 1848 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC008620.2-201ENST00000510294 1569 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 AP002353.1-201ENST00000528257 1599 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 AL139158.3-201ENST00000641212 1562 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC10.59□□□□□ -0.71
VGLL1Q99990 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.59□□□□□ -0.71
VGLL1Q99990 KRT18P36-201ENST00000411618 1276 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 FAM58BP-201ENST00000439056 645 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 LHX6-205ENST00000464484 666 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.59□□□□□ -0.71
VGLL1Q99990 AP000812.2-201ENST00000538934 718 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.59□□□□□ -0.71
VGLL1Q99990 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 AL162426.1-201ENST00000624141 743 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 AL358781.1-202ENST00000321081 1360 ntBASIC10.59□□□□□ -0.71
VGLL1Q99990 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
VGLL1Q99990 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.59□□□□□ -0.71
VGLL1Q99990 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.59□□□□□ -0.71
VGLL1Q99990 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
VGLL1Q99990 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VGLL1Q99990 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms