Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 VENTXP1-201ENST00000569334 2716 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 KRT8P29-201ENST00000420409 1371 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC144522.1-201ENST00000625111 1658 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 PI4KAP2-201ENST00000360806 2080 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 LINC00638-201ENST00000555578 2518 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 MIR663B-201ENST00000408361 115 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 GOLGA2P4-201ENST00000441462 777 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC006122.1-201ENST00000493323 440 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AL160314.3-201ENST00000556041 767 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC005730.2-201ENST00000564549 1184 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AL023803.2-201ENST00000620080 638 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AC133540.1-201ENST00000620845 1019 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 TUBB1P2-201ENST00000422712 1306 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 TUBB1P1-201ENST00000503144 1300 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 CCT8L1P-201ENST00000465400 1674 ntBASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTN4IP1Q8WWV3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTN4IP1Q8WWV3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms