Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 SERPINA13P-202ENST00000478994 924 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC106794.1-201ENST00000506935 792 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC044849.1-201ENST00000519737 1188 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC126915.1-201ENST00000522847 1038 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC124068.2-201ENST00000569473 1109 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AC090164.2-201ENST00000611487 516 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AGGF1P10-201ENST00000635005 2191 ntBASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CFAP61Q8NHU2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 BX324167.2-201ENST00000623717 3316 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 VDAC1P1-201ENST00000439229 848 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC021016.3-201ENST00000608367 477 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC092299.1-201ENST00000632679 757 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 VENTXP1-201ENST00000569334 2716 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AC125807.2-201ENST00000513358 3514 ntBASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFAP61Q8NHU2 TUBB8P4-201ENST00000511806 1324 ntBASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFAP61Q8NHU2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms