Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 PPP1R2P4-201ENST00000424051 595 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AP003398.1-201ENST00000531124 318 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 RN7SL455P-201ENST00000580629 282 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 RN7SL470P-201ENST00000583069 259 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AP005264.5-201ENST00000590066 467 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC084781.1-201ENST00000613737 656 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 MIR7845-201ENST00000618396 99 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AC011491.1-203ENST00000637688 543 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 KRT8P18-201ENST00000413425 1445 ntBASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM48Q8IWZ4 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 KRT8P43-201ENST00000406052 1458 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 RN7SL767P-201ENST00000493013 295 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AC132825.4-202ENST00000578792 434 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 YRDCP1-201ENST00000621419 643 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 CICP16-201ENST00000502609 2813 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AC016397.2-201ENST00000624848 1985 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 CR383656.2-201ENST00000548656 2254 ntBASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM48Q8IWZ4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRIM48Q8IWZ4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms