Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 CES1P1-201ENST00000421606 1704 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC073548.1-201ENST00000624088 1882 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PYY2-201ENST00000315776 282 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC091046.1-201ENST00000331871 207 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL512430.1-201ENST00000392575 860 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC026316.1-201ENST00000398900 414 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC005722.1-201ENST00000431878 964 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL627422.1-201ENST00000434104 580 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 ERP29P1-201ENST00000442902 706 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 MRPL22P1-201ENST00000505398 616 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 MIR4265-201ENST00000582152 99 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC005632.3-201ENST00000605544 308 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC103810.10-201ENST00000606504 343 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC103691.2-201ENST00000618824 433 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 AC025183.3-201ENST00000623526 1482 ntBASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD3Q7Z3D4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 PDXDC2P-206ENST00000534700 1315 ntBASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 MEX3B-202ENST00000558133 4333 ntBASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC126335.2-201ENST00000623362 4637 ntBASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AP000356.3-201ENST00000382243 753 ntBASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 RPL3P2-204ENST00000413027 1203 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms