Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PRADC1P1-201ENST00000412317 525 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC096713.1-201ENST00000514650 978 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC015959.1-201ENST00000623263 1377 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 KLK8-203ENST00000347619 555 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RPL19P20-201ENST00000415648 591 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC008038.1-201ENST00000634247 1314 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC007686.3-201ENST00000619017 3487 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC026304.1-201ENST00000597953 561 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC104440.1-201ENST00000605010 343 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 OR4C3-202ENST00000611380 597 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AL158032.2-201ENST00000616818 195 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC011474.4-201ENST00000623523 2076 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms