Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 AC092506.1-202ENST00000401022 528 ntBASIC12.51□□□□□ -0.41
SUMO3P55854 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.51□□□□□ -0.41
SUMO3P55854 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SUMO3P55854 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.51□□□□□ -0.41
SUMO3P55854 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 STK24P1-201ENST00000455035 1291 ntBASIC12.51□□□□□ -0.41
SUMO3P55854 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.51□□□□□ -0.41
SUMO3P55854 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SUMO3P55854 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.51□□□□□ -0.41
SUMO3P55854 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.51□□□□□ -0.41
SUMO3P55854 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SUMO3P55854 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SUMO3P55854 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.51□□□□□ -0.41
SUMO3P55854 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.51□□□□□ -0.41
SUMO3P55854 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SUMO3P55854 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SUMO3P55854 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.5□□□□□ -0.41
SUMO3P55854 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SUMO3P55854 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SUMO3P55854 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.5□□□□□ -0.41
SUMO3P55854 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.5□□□□□ -0.41
SUMO3P55854 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.5□□□□□ -0.41
SUMO3P55854 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.5□□□□□ -0.41
SUMO3P55854 AC079250.1-201ENST00000456046 531 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 RPL18AP3-201ENST00000462885 528 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 RN7SL375P-201ENST00000492442 298 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 RNA5SP417-201ENST00000516459 108 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 AL132994.1-201ENST00000554098 400 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.5□□□□□ -0.41
SUMO3P55854 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.5□□□□□ -0.41
SUMO3P55854 AC007881.3-201ENST00000608897 607 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.5□□□□□ -0.41
SUMO3P55854 AC242376.2-201ENST00000619355 883 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 LINC00244-201ENST00000625073 613 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.5□□□□□ -0.41
SUMO3P55854 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 AL445250.1-201ENST00000641671 2259 ntBASIC12.5□□□□□ -0.41
SUMO3P55854 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SUMO3P55854 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SUMO3P55854 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 AC004623.1-201ENST00000624592 2127 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 GUCY2EP-203ENST00000531117 1918 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 AC024075.2-201ENST00000598112 1473 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SUMO3P55854 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 TUBB2BP1-201ENST00000404155 871 ntBASIC12.49□□□□□ -0.41
SUMO3P55854 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SUMO3P55854 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.49□□□□□ -0.41
SUMO3P55854 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.49□□□□□ -0.41
SUMO3P55854 FTLP1-201ENST00000449155 526 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms