Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMAD6O43541 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMAD6O43541 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMAD6O43541 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMAD6O43541 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 AC079250.1-201ENST00000456046 531 ntBASIC13.92□□□□□ -0.18
SMAD6O43541 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.92□□□□□ -0.18
SMAD6O43541 AC093909.3-201ENST00000504783 336 ntBASIC13.92□□□□□ -0.18
SMAD6O43541 AC026410.1-201ENST00000507366 1101 ntBASIC13.92□□□□□ -0.18
SMAD6O43541 ALG1L6P-201ENST00000515248 758 ntBASIC13.92□□□□□ -0.18
SMAD6O43541 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.92□□□□□ -0.18
SMAD6O43541 AC132812.1-201ENST00000583145 892 ntBASIC13.92□□□□□ -0.18
SMAD6O43541 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMAD6O43541 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SMAD6O43541 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMAD6O43541 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.92□□□□□ -0.18
SMAD6O43541 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 AL627389.1-201ENST00000413508 1182 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 AC041040.1-201ENST00000425197 460 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.91□□□□□ -0.18
SMAD6O43541 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.91□□□□□ -0.18
SMAD6O43541 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.91□□□□□ -0.18
SMAD6O43541 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 CES1P2-201ENST00000566467 1242 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 AL136982.5-201ENST00000605222 294 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 AC010976.2-201ENST00000609697 852 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 AC011471.3-201ENST00000623576 402 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 AL451007.2-201ENST00000632004 563 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 EGLN3-205ENST00000547327 2849 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms