Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.8□□□□□ -0.04
O00370 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.8□□□□□ -0.04
O00370 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
O00370 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
O00370 AL359845.1-201ENST00000458202 1648 ntBASIC14.8□□□□□ -0.04
O00370 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.8□□□□□ -0.04
O00370 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
O00370 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.8□□□□□ -0.04
O00370 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.8□□□□□ -0.04
O00370 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
O00370 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
O00370 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
O00370 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 AC005722.1-201ENST00000431878 964 ntBASIC14.79□□□□□ -0.04
O00370 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.79□□□□□ -0.04
O00370 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.79□□□□□ -0.04
O00370 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
O00370 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.79□□□□□ -0.04
O00370 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AC125807.2-201ENST00000513358 3514 ntBASIC14.79□□□□□ -0.04
O00370 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
O00370 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.79□□□□□ -0.04
O00370 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.79□□□□□ -0.04
O00370 AL031673.1-201ENST00000611460 466 ntBASIC14.79□□□□□ -0.04
O00370 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.79□□□□□ -0.04
O00370 AC051619.9-201ENST00000623237 597 ntBASIC14.79□□□□□ -0.04
O00370 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
O00370 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
O00370 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AL139385.1-201ENST00000611744 3272 ntBASIC14.79□□□□□ -0.04
O00370 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.79□□□□□ -0.04
O00370 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.79□□□□□ -0.04
O00370 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
O00370 AC020917.4-201ENST00000623994 1999 ntBASIC14.78□□□□□ -0.04
O00370 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.78□□□□□ -0.04
O00370 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.78□□□□□ -0.04
O00370 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
O00370 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.78□□□□□ -0.04
O00370 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 NRADDP-202ENST00000641269 1585 ntBASIC14.78□□□□□ -0.04
O00370 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
O00370 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 PDXDC2P-206ENST00000534700 1315 ntBASIC14.78□□□□□ -0.04
O00370 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.78□□□□□ -0.04
O00370 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
O00370 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
O00370 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.78□□□□□ -0.04
O00370 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.78□□□□□ -0.04
O00370 AC018638.5-201ENST00000450885 754 ntBASIC14.78□□□□□ -0.04
O00370 SCARNA12-201ENST00000459155 270 ntBASIC14.78□□□□□ -0.04
O00370 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.78□□□□□ -0.04
O00370 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.78□□□□□ -0.04
O00370 MRPL22P1-201ENST00000505398 616 ntBASIC14.78□□□□□ -0.04
O00370 AC019193.1-201ENST00000506678 823 ntBASIC14.78□□□□□ -0.04
O00370 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.78□□□□□ -0.04
O00370 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.78□□□□□ -0.04
O00370 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.78□□□□□ -0.04
O00370 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
O00370 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.78□□□□□ -0.04
O00370 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.78□□□□□ -0.04
O00370 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
O00370 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
O00370 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
O00370 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms