Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 AL365181.1-201ENST00000564032 1828 ntBASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20BQ9P0W2 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 AC106827.1-201ENST00000366454 431 ntBASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 AC127024.7-201ENST00000625101 200 ntBASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20BQ9P0W2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AC040160.2-201ENST00000623816 1675 ntBASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 CTBP2P8-201ENST00000422584 1330 ntBASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AC093909.3-201ENST00000504783 336 ntBASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AC013553.1-201ENST00000560906 267 ntBASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms