Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 BX324167.2-201ENST00000623717 3316 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 MARK2P16-201ENST00000605714 1723 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 MIR663B-201ENST00000408361 115 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AL354877.1-201ENST00000424412 413 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 GOLGA2P8-201ENST00000505201 779 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AL358781.1-202ENST00000321081 1360 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 LINC01815-202ENST00000641468 1409 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 RPL13AP3-202ENST00000494676 1473 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC138969.2-201ENST00000532739 9932 ntBASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AMBRA1Q9C0C7 AC022400.8-201ENST00000623453 3599 ntBASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 AC018629.1-201ENST00000623381 1736 ntBASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 ZNF493-208ENST00000599461 1769 ntBASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 PEG13-201ENST00000631594 5667 ntBASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
AMBRA1Q9C0C7 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.02□□□□□ -0.33
AMBRA1Q9C0C7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms