Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 TMBIM7P-202ENST00000641474 1516 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC134407.3-201ENST00000624035 2139 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC090114.2-201ENST00000608477 7054 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 REXO1L1P-201ENST00000379010 6598 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC008132.1-202ENST00000342005 1389 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC246787.1-201ENST00000392301 627 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC007274.2-201ENST00000421675 662 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 TSPY25P-201ENST00000429463 745 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 ST13P19-201ENST00000442505 1124 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC012618.1-201ENST00000461223 412 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 PGAM1P5-201ENST00000548011 764 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC124068.2-201ENST00000569473 1109 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 AL606495.2-201ENST00000605867 535 ntBASIC12.71□□□□□ -0.37
USB1Q9BQ65 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.71□□□□□ -0.37
USB1Q9BQ65 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USB1Q9BQ65 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
USB1Q9BQ65 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
USB1Q9BQ65 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
USB1Q9BQ65 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 AL731571.1-201ENST00000617058 5428 ntBASIC12.71□□□□□ -0.38
USB1Q9BQ65 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.71□□□□□ -0.38
USB1Q9BQ65 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USB1Q9BQ65 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
USB1Q9BQ65 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
USB1Q9BQ65 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USB1Q9BQ65 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms