Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 AC019294.4-201ENST00000561777 2905 ntBASIC13.02□□□□□ -0.33
NUP43Q8NFH3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP43Q8NFH3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AC026320.2-201ENST00000434379 478 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 KLF17P1-201ENST00000547105 1126 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AL161670.2-201ENST00000557650 1227 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AC132825.4-202ENST00000578792 434 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AC008132.1-202ENST00000342005 1389 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 KRT8P31-201ENST00000504812 1408 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 AC004899.2-201ENST00000622993 3860 ntBASIC13.01□□□□□ -0.33
NUP43Q8NFH3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NUP43Q8NFH3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 AC073862.5-201ENST00000624129 2027 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 FP325330.2-201ENST00000624219 5630 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 AC138761.6-201ENST00000583997 1423 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 AC020907.1-201ENST00000616460 1350 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13□□□□□ -0.33
NUP43Q8NFH3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 LINC00265-2P-201ENST00000413372 782 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13□□□□□ -0.33
NUP43Q8NFH3 HNRNPA1P2-207ENST00000432375 960 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13□□□□□ -0.33
NUP43Q8NFH3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 AC007279.1-201ENST00000448547 837 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13□□□□□ -0.33
NUP43Q8NFH3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 AC012618.1-201ENST00000461223 412 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms