Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC132825.4-202ENST00000578792 434 ntBASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC026790.2-201ENST00000606282 430 ntBASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AC051619.9-201ENST00000623237 597 ntBASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AL118506.1-201ENST00000601296 3082 ntBASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD3Q7Z3D4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AL512306.1-201ENST00000432698 848 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FTLP1-201ENST00000449155 526 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 SCARNA12-201ENST00000459155 270 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AC138701.2-201ENST00000553634 226 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 RN7SL718P-201ENST00000581254 303 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AL031673.1-201ENST00000611460 466 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AL161773.1-201ENST00000624845 863 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 AC128714.1-201ENST00000637035 887 ntBASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD3Q7Z3D4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms