Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.42□□□□□ -0.42
H3F3AP84243 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.42□□□□□ -0.42
H3F3AP84243 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 AP005264.5-201ENST00000590066 467 ntBASIC12.42□□□□□ -0.42
H3F3AP84243 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H3F3AP84243 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
H3F3AP84243 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.42□□□□□ -0.42
H3F3AP84243 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.42□□□□□ -0.42
H3F3AP84243 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3F3AP84243 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H3F3AP84243 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 MIR1307-201ENST00000408840 149 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 GUSBP10-201ENST00000417412 665 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.41□□□□□ -0.42
H3F3AP84243 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 SNORD3B-1-201ENST00000577988 758 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.41□□□□□ -0.42
H3F3AP84243 AL031673.1-201ENST00000611460 466 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.41□□□□□ -0.42
H3F3AP84243 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
H3F3AP84243 AL358781.1-202ENST00000321081 1360 ntBASIC12.41□□□□□ -0.42
H3F3AP84243 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.41□□□□□ -0.42
H3F3AP84243 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3F3AP84243 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 AC108024.1-201ENST00000626286 1721 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms