Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 Z98885.3-201ENST00000624882 1757 ntBASIC14.42□□□□□ -0.1
CBX1P83916 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 LRRC37A7P-201ENST00000583900 2759 ntBASIC14.42□□□□□ -0.1
CBX1P83916 MON2-212ENST00000552115 3760 ntTSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
CBX1P83916 TOMM22P5-201ENST00000416399 439 ntBASIC14.42□□□□□ -0.1
CBX1P83916 RPL13P2-201ENST00000440687 659 ntBASIC14.42□□□□□ -0.1
CBX1P83916 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
CBX1P83916 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.42□□□□□ -0.1
CBX1P83916 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.42□□□□□ -0.1
CBX1P83916 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.42□□□□□ -0.1
CBX1P83916 AL049840.3-201ENST00000602669 611 ntBASIC14.42□□□□□ -0.1
CBX1P83916 AC099522.2-201ENST00000607001 744 ntBASIC14.42□□□□□ -0.1
CBX1P83916 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
CBX1P83916 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CBX1P83916 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CBX1P83916 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX1P83916 GOLGA2P1-201ENST00000512938 2906 ntBASIC14.42□□□□□ -0.1
CBX1P83916 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CBX1P83916 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.41□□□□□ -0.1
CBX1P83916 ARSEP1-201ENST00000420443 635 ntBASIC14.41□□□□□ -0.1
CBX1P83916 KRT18P56-201ENST00000507275 550 ntBASIC14.41□□□□□ -0.1
CBX1P83916 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 AC027237.1-201ENST00000560942 655 ntBASIC14.41□□□□□ -0.1
CBX1P83916 AC018845.2-201ENST00000568326 409 ntBASIC14.41□□□□□ -0.1
CBX1P83916 LINC01115-203ENST00000606068 577 ntBASIC14.41□□□□□ -0.1
CBX1P83916 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 MIR7706-201ENST00000613747 67 ntBASIC14.41□□□□□ -0.1
CBX1P83916 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CBX1P83916 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.41□□□□□ -0.1
CBX1P83916 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.41□□□□□ -0.1
CBX1P83916 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CBX1P83916 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.41□□□□□ -0.1
CBX1P83916 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CBX1P83916 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms