Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 AC097359.2-201ENST00000604992 2389 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.6■□□□□ 0.09
CCNA1P78396 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.6■□□□□ 0.09
CCNA1P78396 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC15.6■□□□□ 0.09
CCNA1P78396 RN7SL684P-201ENST00000465665 294 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 AC093700.1-201ENST00000503348 717 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 RN7SL162P-201ENST00000579233 292 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 PRR20FP-201ENST00000603320 180 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 AC123912.6-201ENST00000612657 315 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 AL357143.1-203ENST00000639750 881 ntBASIC15.6■□□□□ 0.09
CCNA1P78396 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.6■□□□□ 0.09
CCNA1P78396 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 AL513497.1-201ENST00000624273 2083 ntBASIC15.59■□□□□ 0.09
CCNA1P78396 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.59■□□□□ 0.09
CCNA1P78396 BRI3P1-201ENST00000440440 378 ntBASIC15.59■□□□□ 0.09
CCNA1P78396 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.59■□□□□ 0.09
CCNA1P78396 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.59■□□□□ 0.09
CCNA1P78396 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.59■□□□□ 0.09
CCNA1P78396 RNA5SP420-201ENST00000516997 137 ntBASIC15.59■□□□□ 0.09
CCNA1P78396 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.59■□□□□ 0.09
CCNA1P78396 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.59■□□□□ 0.09
CCNA1P78396 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCNA1P78396 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCNA1P78396 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.59■□□□□ 0.09
CCNA1P78396 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCNA1P78396 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 AC024075.2-201ENST00000598112 1473 ntBASIC15.59■□□□□ 0.09
CCNA1P78396 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCNA1P78396 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCNA1P78396 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.58■□□□□ 0.09
CCNA1P78396 PTN-202ENST00000393083 1599 ntTSL 5 BASIC15.58■□□□□ 0.09
CCNA1P78396 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCNA1P78396 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CCNA1P78396 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCNA1P78396 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCNA1P78396 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNA1P78396 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCNA1P78396 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.58■□□□□ 0.08
CCNA1P78396 SNORA47-201ENST00000458862 138 ntBASIC15.58■□□□□ 0.08
CCNA1P78396 GYG1-209ENST00000483267 801 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNA1P78396 AC008494.1-201ENST00000497612 796 ntBASIC15.58■□□□□ 0.08
CCNA1P78396 AC113347.2-201ENST00000512350 279 ntBASIC15.58■□□□□ 0.08
CCNA1P78396 AC133555.4-201ENST00000569081 152 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms