Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AC106818.1-201ENST00000623223 3242 ntBASIC13.18□□□□□ -0.3
CLK1P49759 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CLK1P49759 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CLK1P49759 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.18□□□□□ -0.3
CLK1P49759 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AL391647.1-201ENST00000395664 511 ntBASIC13.18□□□□□ -0.3
CLK1P49759 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 HSPB1P2-201ENST00000448722 546 ntBASIC13.18□□□□□ -0.3
CLK1P49759 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.18□□□□□ -0.3
CLK1P49759 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.18□□□□□ -0.3
CLK1P49759 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.18□□□□□ -0.3
CLK1P49759 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
CLK1P49759 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.18□□□□□ -0.3
CLK1P49759 AL162426.1-201ENST00000624141 743 ntBASIC13.18□□□□□ -0.3
CLK1P49759 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AC009474.1-201ENST00000455096 1565 ntBASIC13.18□□□□□ -0.3
CLK1P49759 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 AC064801.2-201ENST00000625052 1303 ntBASIC13.17□□□□□ -0.3
CLK1P49759 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 E2F3P2-201ENST00000447755 1422 ntBASIC13.17□□□□□ -0.3
CLK1P49759 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 BNIP3P42-201ENST00000454982 569 ntBASIC13.17□□□□□ -0.3
CLK1P49759 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.17□□□□□ -0.3
CLK1P49759 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 BNIP3P29-201ENST00000598302 571 ntBASIC13.17□□□□□ -0.3
CLK1P49759 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 AC011447.5-201ENST00000616168 564 ntBASIC13.17□□□□□ -0.3
CLK1P49759 MIR6752-201ENST00000618442 71 ntBASIC13.17□□□□□ -0.3
CLK1P49759 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLK1P49759 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.17□□□□□ -0.3
CLK1P49759 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLK1P49759 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLK1P49759 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms