Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TM4SF4P48230 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TM4SF4P48230 ALMS1P1-201ENST00000428767 921 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 MARK2P9-201ENST00000430958 1727 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 AK2P2-201ENST00000439142 405 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC15.3■□□□□ 0.04
TM4SF4P48230 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TM4SF4P48230 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 IGHV7-56-201ENST00000518372 351 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 AP001979.1-201ENST00000529222 751 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC15.3■□□□□ 0.04
TM4SF4P48230 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.3■□□□□ 0.04
TM4SF4P48230 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 AC103706.1-201ENST00000561761 679 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
TM4SF4P48230 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC15.3■□□□□ 0.04
TM4SF4P48230 MT1G-204ENST00000569500 305 ntTSL 3 BASIC15.3■□□□□ 0.04
TM4SF4P48230 RN7SL460P-201ENST00000582806 258 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC15.3■□□□□ 0.04
TM4SF4P48230 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 AC013472.3-201ENST00000607407 659 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 AC007274.3-201ENST00000619838 385 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 Z82244.1-201ENST00000631502 840 ntBASIC15.3■□□□□ 0.04
TM4SF4P48230 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM4SF4P48230 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TM4SF4P48230 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.29■□□□□ 0.04
TM4SF4P48230 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.29■□□□□ 0.04
TM4SF4P48230 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC099689.1-201ENST00000624383 1302 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 MIR324-201ENST00000362183 83 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC131235.2-201ENST00000445553 1057 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC15.29■□□□□ 0.04
TM4SF4P48230 ASS1P9-201ENST00000513426 1236 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 ELOBP2-201ENST00000526184 355 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC15.29■□□□□ 0.04
TM4SF4P48230 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TM4SF4P48230 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC009118.3-201ENST00000622896 873 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TM4SF4P48230 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TM4SF4P48230 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.29■□□□□ 0.04
TM4SF4P48230 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.29■□□□□ 0.04
TM4SF4P48230 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM4SF4P48230 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TM4SF4P48230 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM4SF4P48230 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC15.28■□□□□ 0.04
TM4SF4P48230 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms