Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.41□□□□□ -0.58
CEACAM3P40198 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 FAM95B1-212ENST00000592873 4692 ntBASIC11.41□□□□□ -0.58
CEACAM3P40198 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CEACAM3P40198 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CEACAM3P40198 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.41□□□□□ -0.58
CEACAM3P40198 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CEACAM3P40198 AC005562.1-201ENST00000583030 3219 ntBASIC11.41□□□□□ -0.58
CEACAM3P40198 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CEACAM3P40198 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 AL928654.5-201ENST00000624831 2501 ntBASIC11.4□□□□□ -0.58
CEACAM3P40198 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 PPP1R2P4-201ENST00000424051 595 ntBASIC11.4□□□□□ -0.58
CEACAM3P40198 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 RPL18AP8-201ENST00000486071 528 ntBASIC11.4□□□□□ -0.58
CEACAM3P40198 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 RN7SL455P-201ENST00000580629 282 ntBASIC11.4□□□□□ -0.58
CEACAM3P40198 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CEACAM3P40198 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CEACAM3P40198 AC006453.1-201ENST00000636037 1257 ntBASIC11.4□□□□□ -0.58
CEACAM3P40198 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.4□□□□□ -0.58
CEACAM3P40198 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CEACAM3P40198 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.59
CEACAM3P40198 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CEACAM3P40198 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 AC099521.3-201ENST00000624251 2938 ntBASIC11.39□□□□□ -0.59
CEACAM3P40198 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CEACAM3P40198 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.39□□□□□ -0.59
CEACAM3P40198 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CEACAM3P40198 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms